LOC107919768 protein (Gossypium hirsutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107919768

BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1. (597 aa)

Predicted Functional Partners:

LOC107901844

0.856

LOC107961798

0.856

LOC107948975

0.742

LOC107910692

0.700

LOC107905658

0.699

LOC107934645

0.699

LOC107952050

0.699

LOC107904335

0.697

LOC107942341

0.697

LOC107920367

0.696

Your Current Organism:

Gossypium hirsutum

NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107901844	LOC107919768	A0A1U8J5L0	A0A1U8KQ77	LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.856
LOC107901844	LOC107948975	A0A1U8J5L0	A0A1U8NM84	LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	Probable WRKY transcription factor 33.	0.480
LOC107904335	LOC107919768	A0A1U8JBU7	A0A1U8KQ77	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.697
LOC107905658	LOC107919768	A0A1U8JC08	A0A1U8KQ77	Probable serine/threonine-protein kinase At4g35230 isoform X1.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.699
LOC107910692	LOC107919768	A0A1U8JV71	A0A1U8KQ77	Probable serine/threonine-protein kinase At4g35230.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.700
LOC107919768	LOC107901844	A0A1U8KQ77	A0A1U8J5L0	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.856
LOC107919768	LOC107904335	A0A1U8KQ77	A0A1U8JBU7	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.697
LOC107919768	LOC107905658	A0A1U8KQ77	A0A1U8JC08	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable serine/threonine-protein kinase At4g35230 isoform X1.	0.699
LOC107919768	LOC107910692	A0A1U8KQ77	A0A1U8JV71	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable serine/threonine-protein kinase At4g35230.	0.700
LOC107919768	LOC107920367	A0A1U8KQ77	A0A1U8KSU0	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable serine/threonine-protein kinase At4g35230 isoform X1.	0.696
LOC107919768	LOC107934645	A0A1U8KQ77	A0A1U8M775	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable serine/threonine-protein kinase At4g35230.	0.699
LOC107919768	LOC107942341	A0A1U8KQ77	A0A1U8N0Y1	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable serine/threonine-protein kinase At4g35230.	0.697
LOC107919768	LOC107948975	A0A1U8KQ77	A0A1U8NM84	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable WRKY transcription factor 33.	0.742
LOC107919768	LOC107952050	A0A1U8KQ77	A0A1U8NUX0	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	Probable serine/threonine-protein kinase At4g35230.	0.699
LOC107919768	LOC107961798	A0A1U8KQ77	A0A1U8PQG7	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.856
LOC107920367	LOC107919768	A0A1U8KSU0	A0A1U8KQ77	Probable serine/threonine-protein kinase At4g35230 isoform X1.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.696
LOC107934645	LOC107919768	A0A1U8M775	A0A1U8KQ77	Probable serine/threonine-protein kinase At4g35230.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.699
LOC107942341	LOC107919768	A0A1U8N0Y1	A0A1U8KQ77	Probable serine/threonine-protein kinase At4g35230.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.697
LOC107948975	LOC107901844	A0A1U8NM84	A0A1U8J5L0	Probable WRKY transcription factor 33.	LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.480
LOC107948975	LOC107919768	A0A1U8NM84	A0A1U8KQ77	Probable WRKY transcription factor 33.	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1.	0.742

page 1 of 2

Server load: low (14%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About