STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107920408Cationic amino acid transporter 1-like. (315 aa)    
Predicted Functional Partners:
LOC107900672
Transmembrane protein 45B-like.
      
 0.658
LOC107902652
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107910734
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107935557
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107935591
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107940303
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107955098
Pectinesterase.
      
 0.658
LOC107958104
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107958102
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
LOC107958101
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.658
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.