STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107919240Pathogenesis-related protein PR-4-like. (157 aa)    
Predicted Functional Partners:
LOC107912800
Uncharacterized protein LOC107912800.
  
     0.528
LOC107909445
Uncharacterized protein LOC107909445.
  
     0.527
LOC107913003
Uncharacterized protein LOC107913003.
  
     0.527
LOC107886672
Uncharacterized protein LOC107886672.
  
     0.524
LOC107936559
Uncharacterized protein LOC107936559.
  
     0.524
LOC107909626
Uncharacterized protein LOC107909626.
  
     0.522
LOC107926749
Uncharacterized protein LOC107926749 isoform X1.
  
     0.520
LOC107946349
Uncharacterized protein LOC107946349 isoform X1.
  
     0.520
LOC107926098
Uncharacterized protein LOC107926098 isoform X1.
  
     0.519
LOC107938454
Mediator-associated protein 2-like.
  
     0.513
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.