STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107920337Glucan endo-1,3-beta-glucosidase 8-like; Belongs to the glycosyl hydrolase 17 family. (365 aa)    
Predicted Functional Partners:
LOC107945368
Actin-related protein 4; Belongs to the actin family.
    
 0.849
LOC107910616
Armadillo repeat-containing protein LFR-like isoform X1.
    
 0.739
LOC107914994
Armadillo repeat-containing protein LFR-like isoform X1.
    
 0.739
LOC107888808
SWI/SNF complex component SNF12 homolog.
    
 0.609
LOC107892165
SWI/SNF complex component SNF12 homolog.
    
 0.609
LOC107904814
SWI/SNF complex component SNF12 homolog.
    
 0.609
LOC107913417
SWI/SNF complex component SNF12 homolog.
    
 0.609
LOC107914203
SWI/SNF complex component SNF12 homolog.
    
 0.609
LOC107926482
SWI/SNF complex component SNF12 homolog.
    
 0.609
LOC107886895
Chromatin structure-remodeling complex protein BSH-like isoform X2.
    
 0.595
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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