STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107922286psbP domain-containing protein 3, chloroplastic. (252 aa)    
Predicted Functional Partners:
LOC107901380
psbP domain-containing protein 5, chloroplastic isoform X1.
  
 
 0.783
LOC107893632
psbP domain-containing protein 6, chloroplastic-like.
   
 
 0.714
LOC107918501
psbP domain-containing protein 6, chloroplastic-like.
   
 
 0.714
LOC107959638
Oxygen-evolving enhancer protein 2, chloroplastic-like.
  
 
 0.650
LOC107959740
Oxygen-evolving enhancer protein 2, chloroplastic-like isoform X1.
  
 
 0.649
LOC107893679
Photosynthetic NDH subunit of lumenal location 2, chloroplastic-like.
   
 
 0.632
LOC107918812
Photosynthetic NDH subunit of lumenal location 2, chloroplastic-like.
   
 
 0.632
LOC107926059
Photosynthetic NDH subunit of lumenal location 1, chloroplastic.
   
 
 0.614
LOC107959886
Photosynthetic NDH subunit of lumenal location 1, chloroplastic-like.
   
 
 0.614
LOC107904111
psbP-like protein 1, chloroplastic.
   
 
 0.579
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.