STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107922299F-box only protein 6-like. (466 aa)    
Predicted Functional Partners:
LOC107957129
Uncharacterized protein LOC107957129.
  
     0.538
LOC107898842
Putative lipid-transfer protein DIR1.
  
     0.537
LOC107915384
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300.
  
     0.532
LOC107889835
Uncharacterized protein LOC107889835.
  
     0.531
LOC107935458
Uncharacterized protein LOC107935458.
  
     0.531
LOC107889735
Putative lipid-transfer protein DIR1.
  
     0.530
LOC107891006
Putative lipid-transfer protein DIR1.
  
     0.530
LOC107898389
Protein LITTLE ZIPPER 3.
  
     0.529
LOC107935337
Uncharacterized protein LOC107935337.
  
     0.529
LOC107940359
Uncharacterized protein LOC107940359.
  
     0.529
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.