STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107922009AT-hook motif nuclear-localized protein 10-like. (364 aa)    
Predicted Functional Partners:
LOC107932184
Uncharacterized protein LOC107932184.
      
 0.480
LOC107950783
Uncharacterized protein LOC107950783.
      
 0.480
LOC107905208
Poly [ADP-ribose] polymerase.
  
     0.465
LOC107957539
Poly [ADP-ribose] polymerase.
  
     0.463
LOC107942368
Uncharacterized protein LOC107942368 isoform X1.
  
 
  0.452
LOC107957869
Poly [ADP-ribose] polymerase.
  
     0.420
LOC107907072
Uncharacterized protein LOC107907072.
  
 
  0.411
LOC107931222
Stress-related protein-like.
  
     0.411
LOC107947556
Stress-related protein-like.
  
     0.410
LOC107905184
Poly [ADP-ribose] polymerase.
  
     0.407
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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