STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107922367Isoflavone reductase-like protein. (308 aa)    
Predicted Functional Partners:
LOC107912153
Calcium-dependent protein kinase 10.
    
 
 0.694
LOC107902047
Calmodulin-7; Belongs to the calmodulin family.
   
 
 0.638
LOC107901902
Organellar oligopeptidase A, chloroplastic/mitochondrial-like.
     
 0.600
LOC107926056
Probable cytosolic oligopeptidase A.
     
 0.600
LOC107932862
Probable cytosolic oligopeptidase A.
     
 0.600
LOC107901373
Sugar transport protein 7-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.467
LOC107962537
Sugar transport protein 7-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.467
LOC107905452
Bifunctional dihydrofolate reductase-thymidylate synthase-like.
    
 0.429
LOC107908795
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.429
LOC107927990
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.429
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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