STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107922313Protein BASIC PENTACYSTEINE2-like. (282 aa)    
Predicted Functional Partners:
LOC107951278
Scarecrow-like protein 8; Belongs to the GRAS family.
  
   
 0.604
LOC107890741
Scarecrow-like protein 8; Belongs to the GRAS family.
  
   
 0.602
LOC107904600
Scarecrow-like protein 8 isoform X1; Belongs to the GRAS family.
  
   
 0.590
LOC107932707
Scarecrow-like protein 8; Belongs to the GRAS family.
  
   
 0.590
LOC107890107
E3 ubiquitin-protein ligase PUB24-like.
  
     0.523
LOC107952029
Scarecrow-like protein 1 isoform X1; Belongs to the GRAS family.
  
   
 0.514
LOC107910415
Scarecrow-like protein 1 isoform X1; Belongs to the GRAS family.
  
   
 0.508
LOC107906681
F-box protein At2g27310-like.
  
     0.502
LOC107959212
F-box protein At2g27310-like.
  
     0.500
LOC107914128
Scarecrow-like protein 1 isoform X1; Belongs to the GRAS family.
  
   
 0.498
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.