STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107924191Uncharacterized protein LOC107924191. (416 aa)    
Predicted Functional Partners:
LOC107900583
Uncharacterized protein LOC107900583.
  
 
 0.583
LOC107921797
Uncharacterized protein LOC107921797.
  
 
 0.567
LOC107921862
Uncharacterized protein LOC107921862.
  
 
 0.551
LOC107908014
Wall-associated receptor kinase 2-like.
  
 
  0.547
LOC107936104
Uncharacterized protein LOC107936104.
  
  
  0.538
LOC107899040
UPF0503 protein At3g09070, chloroplastic-like.
  
    0.527
LOC107898070
UPF0503 protein At3g09070, chloroplastic-like.
  
    0.525
LOC107930147
UPF0503 protein At3g09070, chloroplastic-like.
  
    0.525
LOC107950736
Uncharacterized protein LOC107950736 isoform X1.
  
     0.523
LOC107930711
Probable membrane-associated kinase regulator 4.
  
     0.521
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.