STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107924274Uncharacterized protein LOC107924274. (593 aa)    
Predicted Functional Partners:
LOC107897431
Transcription initiation factor TFIID subunit 9-like.
   
 0.970
LOC107913866
Transcription initiation factor TFIID subunit 9-like.
   
 0.970
LOC107888982
Transcriptional adapter.
   
 0.959
LOC107903913
Transcriptional adapter.
   
 0.959
LOC107957206
Transcriptional adapter.
   
 0.959
LOC107909450
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
    
 0.950
LOC107912807
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
    
 0.950
LOC107912994
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
    
 0.950
LOC107936541
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
    
 0.950
LOC107906791
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.949
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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