STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107924777Uncharacterized protein At1g51745-like. (478 aa)    
Predicted Functional Partners:
LOC107937325
VHS domain-containing protein At3g16270-like.
  
     0.525
LOC107910053
Uncharacterized protein LOC107910053.
  
     0.515
LOC107891706
Uncharacterized protein LOC107891706.
  
     0.514
LOC107886656
Uncharacterized protein LOC107886656.
  
     0.512
LOC107900634
Protein NETWORKED 2A-like.
  
     0.512
LOC107921262
Uncharacterized protein LOC107921262.
  
     0.508
LOC107933066
Disease resistance protein RFL1-like.
  
     0.508
LOC107939010
Uncharacterized protein LOC107939010.
  
     0.508
LOC107907948
Uncharacterized protein LOC107907948.
  
     0.507
LOC107895697
Uncharacterized protein LOC107895697.
  
     0.506
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.