STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107925366Uncharacterized protein LOC107925366. (3213 aa)    
Predicted Functional Partners:
LOC107906933
Uncharacterized protein LOC107906933.
  
 
 0.870
LOC107958901
LOW QUALITY PROTEIN: uncharacterized protein LOC107958901.
  
 
 0.870
LOC107886399
Uncharacterized protein LOC107886399.
  
  
 0.726
LOC107919490
Uncharacterized protein LOC107919490.
  
  
 0.726
LOC107933727
LOW QUALITY PROTEIN: uncharacterized protein LOC107933727.
  
  
 0.726
LOC107941767
Uncharacterized protein LOC107941767 isoform X1.
  
  
 0.726
LOC107897004
Uncharacterized protein LOC107897004.
  
  
 0.574
LOC107913122
Uncharacterized protein LOC107913122 isoform X1.
  
  
 0.573
LOC107918158
AP-5 complex subunit zeta-1-like.
    
 
 0.565
LOC107930322
AP-5 complex subunit zeta-1-like.
    
 
 0.565
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.