STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107926398Uncharacterized protein LOC107926398 isoform X1. (148 aa)    
Predicted Functional Partners:
LOC107888797
Histidine biosynthesis bifunctional protein hisIE, chloroplastic-like isoform X1.
    
  0.710
LOC107922436
Uncharacterized protein LOC107922436 isoform X1.
    
  0.710
LOC107945840
Histidine biosynthesis bifunctional protein hisIE, chloroplastic-like isoform X1.
    
  0.710
LOC107940992
Translocator protein homolog.
      
 0.501
LOC107907478
FGGY carbohydrate kinase domain-containing protein-like.
      
 0.457
LOC107941414
FGGY carbohydrate kinase domain-containing protein-like.
      
 0.457
LOC107956088
LOW QUALITY PROTEIN: nitrogen regulatory protein P-II homolog.
      
 0.451
LOC107929867
Translocator protein homolog.
      
 0.441
LOC107887095
chromodomain-helicase-DNA-binding protein 7-like.
      
 0.440
LOC107949786
chromodomain-helicase-DNA-binding protein 7-like.
      
 0.440
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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