STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107927104ABC transporter B family member 25, mitochondrial-like. (739 aa)    
Predicted Functional Partners:
LOC107888700
Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development.
    
 0.751
LOC107892192
Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development.
    
 0.751
LOC107907417
fe-S cluster assembly factor HCF101, chloroplastic-like.
    
 0.751
LOC107908590
Putative septum site-determining protein minD homolog, chloroplastic.
    
 0.751
LOC107907233
fe-S cluster assembly factor HCF101, chloroplastic-like.
    
 0.751
LOC107915108
Iron-sulfur protein NUBPL.
    
 0.751
LOC107917857
Putative septum site-determining protein minD homolog, chloroplastic.
    
 0.751
LOC107942284
fe-S cluster assembly factor HCF101, chloroplastic-like.
    
 0.751
LOC107944207
Iron-sulfur protein NUBPL-like.
    
 0.751
LOC107924811
ABC transporter B family member 25-like.
  
 
0.712
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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