STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107926247DNA-damage-repair/toleration protein DRT100-like. (370 aa)    
Predicted Functional Partners:
LOC107920132
Plant intracellular Ras-group-related LRR protein 9-like.
  
     0.505
LOC107904301
Plant intracellular Ras-group-related LRR protein 6-like.
  
     0.485
LOC107888365
Plant intracellular Ras-group-related LRR protein 6-like.
  
     0.482
LOC107893494
Plant intracellular Ras-group-related LRR protein 6-like.
  
     0.481
LOC107909600
Disease resistance protein TAO1-like.
  
     0.471
LOC107963181
Disease resistance-like protein CSA1.
  
     0.471
LOC107962461
TMV resistance protein N-like.
  
     0.462
LOC107952298
TMV resistance protein N-like.
  
     0.461
LOC107942069
Beta-galactosidase.
      
 0.449
LOC107909182
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.436
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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