STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107929617F-box/kelch-repeat protein At3g23880-like. (391 aa)    
Predicted Functional Partners:
LOC107908282
MLP-like protein 31.
  
     0.516
LOC107906286
Pentatricopeptide repeat-containing protein At2g30100, chloroplastic-like.
  
     0.515
LOC107958538
Pentatricopeptide repeat-containing protein At2g30100, chloroplastic-like.
  
     0.515
LOC107896066
Kirola-like.
  
     0.511
LOC107888046
MLP-like protein 31.
  
     0.510
LOC107929804
Uncharacterized protein LOC107929804.
  
     0.503
LOC107948211
Uncharacterized protein LOC107948211.
  
     0.502
LOC107895210
Uncharacterized protein LOC107895210.
  
     0.496
LOC107951874
Synaptonemal complex protein 1-like isoform X1.
  
     0.493
LOC107915518
F-box/kelch-repeat protein At3g17530-like.
  
     0.489
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (14%) [HD]