STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107929750(+)-delta-cadinene synthase isozyme XC14-like. (287 aa)    
Predicted Functional Partners:
LOC107940942
(3S,6E)-nerolidol synthase 1-like.
  
 
 
0.913
LOC107924963
(3S,6E)-nerolidol synthase 1-like.
  
 
 
0.913
LOC107925033
(E,E)-alpha-farnesene synthase-like; Belongs to the terpene synthase family.
     
 
0.900
LOC107941108
Alpha-farnesene synthase-like.
     
 
0.900
FPS2
Farnesyl pyrophosphate synthase 2; Belongs to the FPP/GGPP synthase family.
   
 
 0.675
LOC107905737
Farnesyl pyrophosphate synthase 1-like; Belongs to the FPP/GGPP synthase family.
   
 
 0.675
LOC107922380
Farnesyl pyrophosphate synthase 2-like isoform X1; Belongs to the FPP/GGPP synthase family.
   
 
 0.675
LOC107944620
Farnesyl pyrophosphate synthase 2-like; Belongs to the FPP/GGPP synthase family.
   
 
 0.675
LOC107925582
(+)-delta-cadinene synthase isozyme A-like.
  
  
 
0.673
LOC107927038
Probable phytol kinase 3, chloroplastic isoform X1.
      
 0.670
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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