STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107928790Mitochondrial import receptor subunit TOM40-1-like. (311 aa)    
Predicted Functional Partners:
LOC107920723
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
   
 0.954
LOC107926335
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
   
 0.954
LOC107900525
Sorting and assembly machinery component 50 homolog.
    
 0.952
LOC107917814
Uncharacterized protein LOC107917814.
    
 0.952
LOC107917861
Uncharacterized protein LOC107917861.
    
 0.952
LOC107889229
Outer envelope protein 80, chloroplastic-like isoform X1.
    
 0.934
LOC107901215
Outer envelope protein 80, chloroplastic-like isoform X1.
    
 0.934
LOC107888089
Mitochondrial import receptor subunit TOM9-2-like.
   
 0.906
LOC107925946
Mitochondrial import receptor subunit TOM9-2-like.
   
 0.906
LOC107931365
Mitochondrial import receptor subunit TOM9-2-like.
   
 0.906
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.