STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107930509Uncharacterized protein LOC107930509. (628 aa)    
Predicted Functional Partners:
LOC107914701
Uncharacterized protein LOC107914604.
  
     0.539
LOC107911922
Fasciclin-like arabinogalactan protein 10.
  
     0.521
LOC107945624
Fasciclin-like arabinogalactan protein 8.
  
     0.516
LOC107898729
Uncharacterized protein LOC107898729.
  
     0.513
LOC107934906
Uncharacterized protein LOC107934906.
  
     0.513
LOC107937053
Anthocyanidin 3-O-glucosyltransferase 4-like.
  
     0.507
LOC107921185
Uncharacterized protein LOC107921185.
  
     0.505
LOC107893752
Uncharacterized protein LOC107893752.
  
     0.504
LOC107893755
Uncharacterized protein LOC107893755.
  
     0.503
LOC107888626
Uncharacterized protein LOC107888626.
  
     0.499
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.