STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107931035Guanine nucleotide-binding protein subunit beta-like protein. (326 aa)    
Predicted Functional Partners:
LOC107958736
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.982
LOC107942655
40S ribosomal protein S23-like; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.979
LOC107957395
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.979
LOC107891219
40S ribosomal protein S28-like.
   
 
 0.978
LOC107935967
40S ribosomal protein S28.
   
 
 0.978
LOC107891762
60S ribosomal protein L11-like; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.962
LOC107901696
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.962
LOC107960236
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.962
LOC107928364
Elongation factor 1-gamma-like.
   
 
 0.959
LOC107928401
Elongation factor 1-gamma-like.
   
 
 0.959
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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