STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107931529Uncharacterized protein LOC107931529 isoform X1. (87 aa)    
Predicted Functional Partners:
LOC107886334
THO complex subunit 2-like.
   
 0.880
LOC107909965
THO complex subunit 2-like isoform X1.
   
 0.880
LOC107905576
THO complex subunit 5B-like.
   
 0.861
LOC107958125
THO complex subunit 5B-like isoform X1.
   
 0.861
LOC107897015
THO complex subunit 1-like isoform X1.
   
 0.853
LOC107927603
THO complex subunit 1 isoform X1.
   
 0.853
LOC107924564
THO complex subunit 7A-like.
   
 0.843
LOC107950546
THO complex subunit 7A-like.
   
 0.843
LOC107903400
THO complex subunit 3-like.
    
 0.840
LOC107931189
THO complex subunit 3.
    
 0.840
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.