STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107930481Uncharacterized protein LOC107930481. (189 aa)    
Predicted Functional Partners:
LOC107911704
Uncharacterized protein LOC107911704.
      
 0.470
LOC107922969
Uncharacterized protein LOC107922969.
      
 0.470
LOC107917478
Uncharacterized protein LOC107917478.
      
 0.441
LOC107956515
Uncharacterized protein LOC107956515.
      
 0.441
LOC107959289
Uncharacterized protein LOC107959289.
      
 0.441
LOC107918175
RPM1-interacting protein 4-like.
      
 0.428
LOC107903703
Uncharacterized protein LOC107903703 isoform X1.
      
 0.416
LOC107909629
Uncharacterized protein LOC107909629.
      
 0.416
LOC107943707
Uncharacterized protein LOC107943707.
      
 0.416
LOC107959974
Uncharacterized protein LOC107959974.
      
 0.416
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.