STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107930882TMV resistance protein N-like. (606 aa)    
Predicted Functional Partners:
LOC107920132
Plant intracellular Ras-group-related LRR protein 9-like.
  
     0.517
LOC107933584
Plant intracellular Ras-group-related LRR protein 5-like.
  
     0.514
LOC107933706
Plant intracellular Ras-group-related LRR protein 5-like.
  
     0.513
LOC107888365
Plant intracellular Ras-group-related LRR protein 6-like.
  
     0.510
LOC107893494
Plant intracellular Ras-group-related LRR protein 6-like.
  
     0.510
LOC107904301
Plant intracellular Ras-group-related LRR protein 6-like.
  
     0.509
LOC107917213
LRR receptor-like serine/threonine-protein kinase GSO1.
  
     0.495
LOC107943059
LRR receptor-like serine/threonine-protein kinase EFR.
  
     0.491
LOC107960609
Probable LRR receptor-like serine/threonine-protein kinase At1g34110.
  
     0.491
LOC107927102
LRR repeats and ubiquitin-like domain-containing protein At2g30105 isoform X1.
  
     0.490
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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