STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107933741GATA transcription factor 26-like. (529 aa)    
Predicted Functional Partners:
LOC107924274
Uncharacterized protein LOC107924274.
  
 
  0.559
LOC107945420
Uncharacterized protein LOC107945420.
  
 
  0.554
LOC107933975
Uncharacterized protein LOC107933975 isoform X1.
  
     0.504
LOC107960741
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12.
  
     0.500
LOC107954027
Uncharacterized protein LOC107954027.
  
     0.497
LOC107905983
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12-like.
  
     0.494
LOC107955944
Mediator-associated protein 1-like.
  
 
  0.494
LOC107904102
Uncharacterized protein LOC107904102.
  
     0.490
LOC107957339
Uncharacterized protein LOC107957339.
  
     0.490
LOC107924143
Uncharacterized protein LOC107924143 isoform X1.
  
     0.488
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.