STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107934015Formin-like protein 21b. (125 aa)    
Predicted Functional Partners:
LOC107961125
Cellulose synthase A catalytic subunit 8 [UDP-forming]-like.
  
     0.542
LOC107938505
Glucan endo-1,3-beta-D-glucosidase-like isoform X1.
  
     0.541
LOC107894987
Uncharacterized protein At1g04910-like.
  
     0.540
LOC107919562
Uncharacterized protein At1g04910-like.
  
     0.540
LOC107930804
Rho guanine nucleotide exchange factor 8-like.
  
     0.540
LOC107935225
Cellulose synthase-like protein G3.
  
     0.540
LOC107945738
Uncharacterized protein LOC107945738.
  
     0.540
LOC107957324
Formin-like protein 17 isoform X1.
  
     0.540
LOC107911227
LOB domain-containing protein 25-like.
  
     0.539
LOC107939953
LOB domain-containing protein 16-like.
  
     0.539
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (20%) [HD]