STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107934522Uncharacterized protein LOC107921484. (399 aa)    
Predicted Functional Partners:
LOC107952453
Uncharacterized protein LOC107952453.
  
     0.468
LOC107944252
Uncharacterized protein LOC107944252.
  
     0.465
LOC107944427
Uncharacterized protein LOC107944427.
  
     0.462
LOC107944349
Uncharacterized protein LOC107944349.
  
     0.461
LOC107943392
Uncharacterized protein LOC107943392.
  
     0.459
LOC107943233
Uncharacterized protein LOC107943233.
  
     0.457
LOC107944691
Uncharacterized protein LOC107944691.
  
     0.457
LOC107956415
Uncharacterized protein LOC107956415.
  
     0.457
LOC107942721
Uncharacterized protein LOC107942721.
  
     0.455
LOC107943457
Uncharacterized protein LOC107943457.
  
     0.455
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.