STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107934587Digalactosyldiacylglycerol synthase 1, chloroplastic-like isoform X1. (213 aa)    
Predicted Functional Partners:
LOC107911347
Auxin-induced protein 15A-like.
  
     0.525
LOC107908758
Auxin-induced protein 15A-like.
  
     0.519
LOC107958237
Auxin-induced protein 15A-like.
  
     0.519
LOC107905498
Auxin-induced protein 15A-like.
  
     0.518
LOC107900433
Auxin-induced protein 15A-like.
  
     0.516
LOC107939144
Auxin-induced protein 15A-like.
  
     0.516
LOC107904973
Auxin-induced protein 15A-like.
  
     0.515
LOC107917540
Auxin-induced protein 15A-like.
  
     0.513
LOC107949392
Auxin-responsive protein SAUR15-like.
  
     0.512
LOC107918965
Auxin-induced protein 15A-like.
  
     0.511
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.