STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107933900Glucan endo-1,3-beta-glucosidase-like. (115 aa)    
Predicted Functional Partners:
LOC107914803
Protein LATERAL ORGAN BOUNDARIES-like.
  
     0.485
LOC107957628
Protein LATERAL ORGAN BOUNDARIES-like.
  
     0.482
LOC107893357
Growth-regulating factor 6-like.
  
     0.477
LOC107941864
Transcription factor bHLH140-like.
  
     0.470
LOC107932008
Growth-regulating factor 6-like.
  
     0.467
ROX
Transcription factor bHLH140-like.
  
     0.464
LOC107886179
Chromophore lyase CRL, chloroplastic-like.
  
     0.463
LOC107898258
Transcription factor bHLH140-like.
  
     0.463
LOC107912061
Chromophore lyase CRL, chloroplastic-like.
  
     0.460
LOC107949626
Chromophore lyase CRL, chloroplastic-like isoform X1.
  
     0.460
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.