STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107934931Squalene monooxygenase-like. (534 aa)    
Predicted Functional Partners:
LOC107908820
Squalene synthase-like.
  
 
 0.961
LOC107928014
Squalene synthase-like.
  
 
 0.961
LOC107928928
Squalene synthase-like isoform X1.
  
 
 0.961
LOC107937000
Squalene synthase-like.
  
 
 0.961
LOC107962932
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.914
LOC107906373
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.913
LOC107944512
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.913
LOC107958478
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.913
LOC107937177
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.891
LOC107958480
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.890
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.