Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC107886376 | LOC107934266 | A0A1U8HIB3 | A0A1U8M924 | Squamosa promoter-binding-like protein 16. | Putative disease resistance protein RGA3; Belongs to the disease resistance NB-LRR family. | 0.426 |
LOC107911700 | LOC107934266 | A0A1U8JXS9 | A0A1U8M924 | Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. | Putative disease resistance protein RGA3; Belongs to the disease resistance NB-LRR family. | 0.465 |
LOC107934266 | LOC107886376 | A0A1U8M924 | A0A1U8HIB3 | Putative disease resistance protein RGA3; Belongs to the disease resistance NB-LRR family. | Squamosa promoter-binding-like protein 16. | 0.426 |
LOC107934266 | LOC107911700 | A0A1U8M924 | A0A1U8JXS9 | Putative disease resistance protein RGA3; Belongs to the disease resistance NB-LRR family. | Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. | 0.465 |
LOC107934266 | LOC107943835 | A0A1U8M924 | A0A1U8N266 | Putative disease resistance protein RGA3; Belongs to the disease resistance NB-LRR family. | Classical arabinogalactan protein 5. | 0.462 |
LOC107943835 | LOC107934266 | A0A1U8N266 | A0A1U8M924 | Classical arabinogalactan protein 5. | Putative disease resistance protein RGA3; Belongs to the disease resistance NB-LRR family. | 0.462 |