STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107935382Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (333 aa)    
Predicted Functional Partners:
LOC107914840
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.707
LOC107897230
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.705
LOC107909232
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.705
LOC107937357
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.705
LOC107913166
Gibberellin 20 oxidase 1-D-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.702
LOC107939172
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.702
LOC107956573
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.702
LOC107933157
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.701
GA20ox1
Gibberellin 20 oxidase 1-A-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.701
LOC107953651
Gibberellin 20 oxidase 1-D-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.700
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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