STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107935931Uncharacterized protein LOC107935931. (245 aa)    
Predicted Functional Partners:
LOC107952765
Uncharacterized protein LOC107952765 isoform X1.
  
     0.520
LOC107892101
Uncharacterized protein LOC107892101 isoform X1.
  
     0.518
LOC107895448
Uncharacterized protein At1g65710-like.
  
     0.515
LOC107946667
Uncharacterized protein LOC107946667.
  
     0.513
LOC107912865
Uncharacterized protein At1g65710-like.
  
     0.511
LOC107945083
Uncharacterized protein LOC107945083.
  
     0.509
LOC107950963
Protein LONGIFOLIA 1-like isoform X1.
  
     0.507
LOC107946772
Uncharacterized protein LOC107946772.
  
     0.506
LOC107937817
Uncharacterized protein LOC107937817.
  
     0.504
LOC107944425
Homeobox-leucine zipper protein ATHB-23-like.
  
     0.504
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.