Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107936124Probable receptor-like protein kinase At5g18500 isoform X1; Belongs to the protein kinase superfamily. (493 aa)    
Predicted Functional Partners:
LOC107918071
Heptahelical transmembrane protein 2-like.
     
 0.629
LOC107930202
Pentatricopeptide repeat-containing protein At5g66520-like.
      
 0.593
LOC107895207
Putative beta-glucosidase 41; Belongs to the glycosyl hydrolase 1 family.
     
 0.544
LOC107920057
Putative beta-glucosidase 41 isoform X1; Belongs to the glycosyl hydrolase 1 family.
     
 0.544
LOC107898756
Methyltransferase-like protein 13.
      
 0.518
LOC107928595
Methyltransferase-like protein 13.
      
 0.518
LOC107929170
Methyltransferase-like protein 13.
      
 0.518
LOC107945160
Methyltransferase-like protein 13.
      
 0.518
LOC107943835
Classical arabinogalactan protein 5.
    
 0.452
LOC107891389
CDPK-related kinase 7-like isoform X1.
  
 
  0.449
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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