STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107936377Growth-regulating factor 10-like. (242 aa)    
Predicted Functional Partners:
LOC107942368
Uncharacterized protein LOC107942368 isoform X1.
  
     0.500
LOC107907072
Uncharacterized protein LOC107907072.
  
     0.492
LOC107950414
Zinc-finger homeodomain protein 2-like isoform X1.
  
     0.459
LOC107958820
Uncharacterized protein LOC107958820.
  
     0.457
LOC107905208
Poly [ADP-ribose] polymerase.
  
     0.456
LOC107951698
Zinc-finger homeodomain protein 2-like isoform X1.
  
     0.455
LOC107957539
Poly [ADP-ribose] polymerase.
  
     0.455
LOC107896660
Zinc-finger homeodomain protein 4-like.
  
     0.450
LOC107961883
Uncharacterized protein LOC107961883 isoform X1.
  
     0.449
LOC107905712
Protein CUP-SHAPED COTYLEDON 3-like.
  
     0.444
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.