STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107937225ABC transporter D family member 1-like. (1340 aa)    
Predicted Functional Partners:
LOC107886078
Peroxisome biogenesis protein 19-2-like.
    
 0.890
LOC107929325
Peroxisome biogenesis protein 19-2-like.
    
 0.890
LOC107934061
Peroxisome biogenesis protein 19-2-like.
    
 0.890
LOC107888798
Peroxisome biogenesis protein 3-2-like isoform X1.
   
 0.801
LOC107910903
Peroxisome biogenesis protein 3-2-like.
   
 0.801
LOC107945841
Peroxisome biogenesis protein 3-2-like.
   
 0.801
LOC107890962
LIMR family protein At5g01460.
    
 0.782
LOC107892668
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.782
LOC107928763
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.782
LOC107937066
LIMR family protein At5g01460-like.
    
 0.782
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.