STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107938330Protein PHLOEM PROTEIN 2-LIKE A10-like. (396 aa)    
Predicted Functional Partners:
LOC107955793
Uncharacterized protein LOC107955793.
  
     0.424
LOC107903593
Dynamin-related protein 5A-like.
  
     0.420
LOC107887321
UV-B-induced protein At3g17800, chloroplastic-like.
  
     0.412
LOC107908433
UV-B-induced protein At3g17800, chloroplastic-like.
  
     0.407
LOC107931002
UV-B-induced protein At3g17800, chloroplastic-like.
  
     0.407
LOC107931024
UV-B-induced protein At3g17800, chloroplastic-like.
  
     0.400
LOC107947827
Uncharacterized protein LOC107947827.
  
     0.400
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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