STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107938555Uncharacterized protein LOC107938555 isoform X1. (332 aa)    
Predicted Functional Partners:
LOC107909109
Phospholipase A(1) LCAT3-like isoform X1.
      
 0.461
LOC107928340
Phospholipase A(1) LCAT3-like isoform X1.
      
 0.461
LOC107917888
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.459
LOC107922277
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.459
LOC107932808
Peroxiredoxin Q, chloroplastic.
     
 0.450
LOC107908123
Uncharacterized protein LOC107908123.
      
 0.447
LOC107907644
Uncharacterized protein LOC107907644.
      
 0.447
LOC107952400
Uncharacterized protein LOC107952400.
      
 0.447
LOC107962947
Uncharacterized protein LOC107962947.
      
 0.447
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.