Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107939812Probable serine/threonine-protein kinase At1g54610. (591 aa)    
Predicted Functional Partners:
LOC107891752
cyclin-T1-5-like isoform X1; Belongs to the cyclin family.
    
 0.735
LOC107897485
cyclin-T1-4-like; Belongs to the cyclin family.
    
 0.735
LOC107905455
cyclin-T1-3-like; Belongs to the cyclin family.
    
 0.735
LOC107916435
cyclin-T1-4-like; Belongs to the cyclin family.
    
 0.735
LOC107933082
cyclin-T1-4-like; Belongs to the cyclin family.
    
 0.735
LOC107957940
cyclin-T1-3-like; Belongs to the cyclin family.
    
 0.735
LOC107927745
Protein CDC73 homolog.
    
 
 0.682
LOC107888795
Cyclin-dependent kinase D-3-like isoform X1; Belongs to the protein kinase superfamily.
    
 0.653
LOC107890841
Cyclin-dependent kinase D-3-like; Belongs to the protein kinase superfamily.
    
 0.653
LOC107899055
Cyclin-dependent kinase D-3-like; Belongs to the protein kinase superfamily.
    
 0.653
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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