STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107938912Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial. (1414 aa)    
Predicted Functional Partners:
LOC107910072
Phosphoribosylglycinamide formyltransferase, chloroplastic-like.
  
 
 0.995
LOC107912339
Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic-like.
  
 
 0.995
LOC107924705
Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like.
  
 
 0.995
LOC107961941
Phosphoribosylglycinamide formyltransferase, chloroplastic-like.
  
 
 0.995
LOC107955158
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.983
LOC107905071
Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like.
  
 0.966
LOC107957797
Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like.
  
 0.966
LOC107902025
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.965
LOC107920287
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.965
LOC107927942
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.965
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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