STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10794032526S proteasome non-ATPase regulatory subunit 14 homolog. (312 aa)    
Predicted Functional Partners:
LOC107911700
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.993
LOC107926275
26S proteasome regulatory subunit RPN13.
   
 0.993
LOC107893636
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
  
 0.992
LOC107920480
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
  
 0.992
LOC107930935
26S protease regulatory subunit 6A homolog; Belongs to the AAA ATPase family.
  
 0.992
LOC107909070
26S proteasome non-ATPase regulatory subunit 8 homolog A-like.
   
 0.991
LOC107928402
26S proteasome non-ATPase regulatory subunit 8 homolog A.
   
 0.991
LOC107891564
26S proteasome non-ATPase regulatory subunit 7 homolog A-like.
   
 0.987
LOC107898730
26S proteasome non-ATPase regulatory subunit 11 homolog.
   
 0.987
LOC107909095
26S proteasome non-ATPase regulatory subunit 12 homolog A-like.
   
 0.987
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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