STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107942043Probable 2-oxoglutarate-dependent dioxygenase AOP1. (119 aa)    
Predicted Functional Partners:
LOC107889070
Gibberellin 2-beta-dioxygenase 8-like isoform X1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.471
LOC107891609
Gibberellin 2-beta-dioxygenase 8-like isoform X1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.464
LOC107933157
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.460
LOC107956573
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.460
LOC107939172
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.458
LOC107910888
Gibberellin 20 oxidase 2-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.454
LOC107921622
Codeine O-demethylase-like.
  
     0.450
LOC107918693
Protein DMR6-LIKE OXYGENASE 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.441
LOC107950928
Protein DOWNY MILDEW RESISTANCE 6-like.
  
     0.439
LOC107929350
Probable iron/ascorbate oxidoreductase DDB_G0283291.
  
   
 0.436
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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