STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107942547Uncharacterized protein LOC107942547 isoform X1. (1006 aa)    
Predicted Functional Partners:
LOC107931455
Protein LONGIFOLIA 2-like.
  
   
 0.708
LOC107953485
Protein LONGIFOLIA 1-like.
  
   
 0.705
LOC107898006
Uncharacterized protein LOC107898006.
  
     0.517
LOC107929307
Uncharacterized protein LOC107929307 isoform X1.
  
     0.514
LOC107906590
Uncharacterized protein LOC107906590.
  
     0.511
LOC107963777
Uncharacterized protein LOC107963777.
  
     0.511
LOC107936966
Uncharacterized protein LOC107936966.
  
     0.510
LOC107905496
Filament-like plant protein 4.
  
    0.509
LOC107939220
Uncharacterized protein LOC107939220.
  
     0.509
LOC107926698
Protein IQ-DOMAIN 31-like isoform X1.
  
     0.508
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.