STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107942548Uncharacterized mitochondrial protein AtMg00810-like. (210 aa)    
Predicted Functional Partners:
LOC107887920
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.527
LOC107919894
Uncharacterized protein LOC107919894.
  
     0.527
LOC107956812
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.526
LOC107936685
Uncharacterized protein LOC107936685.
  
     0.525
LOC107898034
Uncharacterized protein LOC107898034.
  
     0.524
LOC107960088
Uncharacterized protein LOC107960088.
  
     0.524
LOC107898142
Uncharacterized protein LOC107898142.
  
     0.523
LOC107933555
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.522
LOC107921688
Uncharacterized protein LOC107921688.
  
     0.520
LOC107917409
Uncharacterized protein LOC107917409.
  
     0.518
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.