STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107944267Protein BOBBER 1-like. (269 aa)    
Predicted Functional Partners:
LOC107931469
Uncharacterized protein LOC107931469.
   
 0.869
LOC107900605
Mitotic spindle checkpoint protein MAD1-like.
    
  0.649
LOC107961827
Mitotic spindle checkpoint protein MAD1-like.
    
  0.649
LOC107917842
Centromere/kinetochore protein zw10 homolog.
     
 0.611
LOC107954706
Centromere/kinetochore protein zw10 homolog isoform X1.
     
 0.611
LOC107888788
CLIP-associated protein-like isoform X1.
     
 0.607
LOC107890436
CLIP-associated protein-like isoform X1.
     
 0.607
LOC107894134
Mitotic checkpoint serine/threonine-protein kinase BUB1-like.
     
 0.607
LOC107901897
CLIP-associated protein-like isoform X1.
     
 0.607
LOC107904407
Mitotic spindle checkpoint protein BUBR1-like.
     
 0.607
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.