STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107944425Homeobox-leucine zipper protein ATHB-23-like. (148 aa)    
Predicted Functional Partners:
LOC107907835
LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2.
  
     0.530
LOC107943425
WEB family protein At1g75720-like isoform X1.
  
     0.525
LOC107914612
Uncharacterized protein LOC107914612.
  
     0.524
LOC107957581
WEB family protein At1g75720-like.
  
     0.524
LOC107896785
Uncharacterized protein LOC107896785.
  
     0.522
LOC107936531
WEB family protein At1g75720-like.
  
     0.522
LOC107911318
WEB family protein At2g17940-like.
  
     0.521
LOC107925958
Calmodulin-binding protein 25-like.
  
     0.521
LOC107911346
WEB family protein At3g51220-like.
  
     0.516
LOC107940717
WEB family protein At1g75720-like.
  
     0.514
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.