STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107947099BTB/POZ domain-containing protein POB1-like. (562 aa)    
Predicted Functional Partners:
LOC107887198
E3 ubiquitin-protein ligase PRT1-like isoform X1.
    
 0.686
LOC107890567
E3 ubiquitin-protein ligase PRT1-like isoform X1.
    
 0.686
LOC107908475
E3 ubiquitin-protein ligase PRT1-like.
    
 0.686
LOC107912575
E3 ubiquitin-protein ligase PRT1-like.
    
 0.686
LOC107924605
E3 ubiquitin-protein ligase PRT1-like.
    
 0.686
LOC107942922
E3 ubiquitin-protein ligase PRT1-like.
    
 0.686
LOC107886212
Protein NBR1 homolog.
    
 0.673
LOC107912046
Protein NBR1 homolog.
    
 0.673
LOC107924432
Protein NBR1 homolog.
    
 0.673
LOC107937455
Protein NBR1 homolog.
    
 0.673
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.