STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107947322Uncharacterized protein LOC107947322 isoform X1. (135 aa)    
Predicted Functional Partners:
LOC107939504
Uncharacterized protein LOC107939504.
  
     0.535
LOC107909922
Abscisic acid receptor PYL8-like.
  
     0.532
LOC107914897
Uncharacterized protein LOC107914897.
  
     0.532
LOC107915119
Uncharacterized protein LOC107915119.
  
     0.532
LOC107934377
Uncharacterized protein LOC107934377.
  
     0.532
LOC107918999
UPF0481 protein At3g47200-like.
  
     0.531
LOC107938918
Uncharacterized protein LOC107938918.
  
     0.529
LOC107940104
Uncharacterized protein LOC107940104.
  
     0.529
LOC107919214
Uncharacterized protein LOC107919214.
  
     0.527
LOC107919211
Uncharacterized protein LOC107919211.
  
     0.527
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.