STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107946656Uncharacterized protein LOC107946656. (705 aa)    
Predicted Functional Partners:
LOC107946449
NAC domain-containing protein 8-like.
  
   
 0.588
LOC107934800
NAC domain-containing protein 8-like.
  
   
 0.585
LOC107933634
Serine/threonine-protein kinase ATM-like; Belongs to the PI3/PI4-kinase family.
  
   
 0.542
LOC107892485
Serine/threonine-protein kinase ATM-like; Belongs to the PI3/PI4-kinase family.
  
   
 0.541
LOC107899265
Protein ALUMINUM SENSITIVE 3-like.
      
 0.505
LOC107935715
LOW QUALITY PROTEIN: nijmegen breakage syndrome 1 protein.
      
 0.505
LOC107934556
Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial.
  
     0.501
LOC107893701
Uncharacterized protein LOC107893701.
  
     0.496
LOC107918741
Uncharacterized protein LOC107918741.
  
     0.494
LOC107922895
Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial.
  
     0.494
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.