STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107948375Uncharacterized protein LOC107948375. (447 aa)    
Predicted Functional Partners:
LOC107886262
Uncharacterized protein LOC107886262.
  
     0.536
LOC107915317
Uncharacterized protein LOC107915317.
  
     0.526
LOC107950929
F-box protein CPR30-like.
  
     0.525
LOC107895537
Uncharacterized protein LOC107895537.
  
     0.523
LOC107947279
Uncharacterized protein LOC107947279.
  
     0.522
LOC107949704
Uncharacterized protein LOC107949704.
  
     0.522
LOC107897218
F-box protein CPR30-like.
  
     0.516
LOC107915249
F-box protein CPR30-like.
  
     0.515
LOC107940948
Uncharacterized protein LOC107940948.
  
     0.514
LOC107952406
F-box protein CPR30-like.
  
     0.513
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.